Wolfgang Haas1, Jack E. Sublett1, Deepak Kaushal2 and Elaine I. Tuomanen1#.
1 Department of Infectious Diseases, St Jude Children's Research Hospital
2 Hartwell Center for Bioinformatics and Biotechnology, St Jude Children's Research Hospital
# Corresponding author
| Amplicon | PCR primers |
| ermB | 5’-AGTCCCGGGAATAAGACTTAGAAGCAAACTTAAGAGTGT 5’-CCTGCAGGGCCCGACATTTATTTGTATAGTTCATCCA 5’-TTCCAAATTTACAAAAGCGACTCA 5’-AATAAGACTTAGAAGAAACTTAAGAGTGT |
| 5’ of vex3 | 5’-AGGCAAGAGCTCGATCTTCCTA 5’-AACGCCGGCTCCCTTTCTAGATTTTGTTTTAATCA 5’-GAGTCGCTTTTGTAAATTTGGAATCCCTTTCTAGATTTTGT TTTAATCA |
| 3’ of vex3 | 5’-AAGCGGCCGTGCTGGATGGTGAATAAATTTGAA 5’-CATTGCGCACAGTGAGGATACA 5’-ACACTCTTAAGTTTCTTCTAAGTCTTATTTGCTGGA TGGTGAATAAATTTGAA |
| 5’ of pep27 | 5’-CTAGTCGAAGGAGAGCACTTAACC 5’-TATGCCGGCGCACTAAAGTACAAAGAAAGCAACTG |
| 3’ of pep27 | 5’-AAACGGCCGGCAAGAGACTATAATAGAAAATAGGG 5’-AACTTGTCCTCGGTCATCTCAC |
| 5’ of vncR | 5’-CACTCGTCAAGAGCTCCTCTAAC 5’-TTTGCCGGCTTTAACTGCTCTCTATTTTTTATTTTTC |
| 3’ of vncR | 5’-TCACGGCCGTGCGGAAAAAGCTAGACTTGGA 5’-ACTAAGCCACCTGGAACAGAGT |
| 5’ of vncS | 5’-TTGGTGGTGGTGCAGAAGTAGA 5’-GTTGCCGGCTCGCTCCAATTTATAACCAACA 5’-TGAGTCGCTTTTGTAAATTTGGAAGAAGGTATAGAT AAATATCTTTGCAA |
| 3’ of vncS | 5’-CTTCGGCCGAGATTTTCCAAAAGTCGTCCAAGA 5’-TACGAGTTGCGTTAGCGAATGC 5’-ACACTCTTAAGTTTCTTCTAAGTCTTATTAGATTTT CCAAAAGTCGTCCAAGA |
| 5’ of lytA | 5’-AGCTTGTACGCGGATCTCTTGG 5’-AATTGCCGGCTTCTACTCCTTATCAATTAAAACAACTCA 5’-TGAGTCGCTTTTGTAAATTTGGAATTCTACTCCTTATCAAT TAAAACAACTCA |
| 3’ of lytA | 5’-AGACGGCCGGATTACAGTAAAATAATAATGGAATGTC 5’-CTATCGGCGATTCACCATCAGC 5’-ACACTCTTAAGTTTCTTCTAAGTCTTATTGATTACAGTA AAATAATAATGGAATGTC |
| 5’ of SP2155 | 5’-ATGCTCTTCGCTCTTCTGTTCC 5’-TCAGCCGGCCTCCCATCATTCATTATTACTGTATATTT |
| 3’ of SP2155 | 5’-AACCGGCCGAATCGATCAGGACAGTCAAATC 5’-GTCAAGACGGCACAGGAAGAC |
| fcsK promoter | 5’-AAGCGTCGACATATTGAAAAAATAAAACGTGG 5’-CGCTTCCATATGTCTCCTCCCTTCGTCCTTG |
| vncR gene | 5’-CAAGGACGAAGGGAGGAGACATATGAAAATTTTAAT TGTAGAAGATGAAGAGATGATC 5’-GCAGGGATCCAGAACACCATATGTCGAGAAGGTATAGAT |