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Supplementary Information

Section III continued...

Table S5. Top 100 chi-square probe sets selected for Hyperdiploid >50 in decision tree format

  U133 probe set Gene description Symbol Location GenBank Reference Chi-square value HD>50
above/below mean		 Fold change old or new
1 200600_at Moesin (membrane-organizing extensio spike protein) MSN Xq11.2-q12 NM_002444.1 34.0 Above 1.9 old
2 200737_at Phosphoglycerate kinase 1 PGK1 Xq13 NM_000291.1 34.0 Above 1.8 old
3 200980_s_at Pyruvate dehydrogenase (lipoamide) alpha 1 PDHA1 Xp22.2-p22.1 NM_000284.1 34.0 Above 1.7 new
4 201136_at Proteolipid protein 2 (colonic epithelium-enriched) PLP2 Xp11.23 NM_002668.1 34.0 Above 3.3 old
5 201807_at Vacuolar protein sorting 26 (yeast) VPS26 10q21.1 NM_004896.1 34.0 Above 1.7 old
6 202214_s_at Cullin 4B CUL4B Xq23 NM_003588.1 34.0 Above 1.9 new
7 202557_at Stress 70 protein chaperone, microsome associated, 60 kD STCH 21q11 AI718418 34.0 Above 2.0 new
8 202593_s_at membrane interacting protein of RGS16 MIR16 16p12-p11.2 NM_016641.1 34.0 Below 1.6 new
9 203680_at Protein kinase, cAMP-dependent, regulatory, type II, beta PRKAR2B 7q22-q31.1 NM_002736.1 34.0 Above 3.3 new
10 204194_at BTB and CNC homology 1, basic leucine zipper transcription factor 1 BACH1 21q22.11 NM_001186.1 34.0 Above 1.8 new
11 205324_s_at FtsJ homolog 1 (E. coli) FTSJ1 Xp11.23 NM_012280.1 34.0 Above 2.1 old
12 208598_s_at Upstream regulatory element binding protein 1 UREB1 Xp11.22 NM_005703.2 34.0 Above 1.6 old
13 208861_s_at Alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) ATRX Xq13.1-q21.1 U72937.2 34.0 Above 1.7 old
14 211342_x_at trinucleotide repeat containing 11 (THR-associated protein, 230 kDa subunit) TNRC11 Xq13 BC004354.1 34.0 Above 1.8 new
15 216071_x_at Trinucleotide repeat containing 11 TNRC11 Xq13 AF132033 34.0 Above 1.8 new
16 218573_at APR-1 protein/melanoma-associated antigen MAGEH1 Xp11.22 NM_014061.1 34.0 Above 3.0 new
17 219485_s_at proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 PSMD10 Xq22.3 NM_002814.1 34.0 Above 2.4 old
18 200655_s_at Calmodulin 1 (phosphorylase kinase, delta) CALM1 14q24-q31 NM_006888.1 30.1 Above 1.7 old
19 200738_s_at Phosphoglycerate kinase 1 PGK1 Xq13 NM_000291.1 30.1 Above 1.8 old
20 200944_s_at High-mobility group (nonhistone chromosomal) protein 14; member of the HMG 14/17 family HMG14 21q22.2 NM_004965.1 30.1 Above 1.7 old
21 201092_at Retinoblastoma binding protein 7 RBBP7 Xp22.31 NM_002893.2 30.1 Above 1.6 new
22 201100_s_at Ubiquitin specific protease 9 USP9X Xp11.4 NM_004652.2 30.1 Above 1.7 old
23 201688_s_at Tumor protein D52 TPD52 8q21 BE974098 30.1 Below 4.1 new
24 201899_s_at Ubiquitin-conjugating enzyme E2A (RAD6 homolog) UBE2A Xq24-q25 NM_003336.1 30.1 Above 1.8 old
25 202325_s_at ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 ATP5J 21q21.1 NM_001685.1 30.1 Above 1.6 old
26 202829_s_at Synaptobrevin-like 1 SYBL1 Xq28 NM_005638.1 30.1 Above 1.5 old
27 202854_at Hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome) HPRT1 Xq26.1 NM_000194.1 30.1 Above 1.4 old
28 206846_s_at Histone deacetylase 6 HDAC6 Xp11.23 NM_006044.2 30.1 Above 1.5 new
29 209370_s_at SH3-domain binding protein 2 SH3BP2 4p16.3 AB000462.1 30.1 Above 3.1 new
30 209565_at zinc finger protein 183 (RING finger, C3HC4 type) ZNF183 Xq25-q26 BC000832.1 30.1 Above 2.2 new
31 212846_at KIAA0179 protein. KIAA0179 21q22.3 D80001.1 30.1 Above 2.0 old
32 217356_s_at Phosphoglycerate kinase PGK1 Xq13 S81916.1 30.1 Above 1.8 new
33 218163_at MCT-1 protein MCT-1 Xq22-24 NM_014060.1 30.1 Above 1.8 new
34 218386_x_at Ubiquitin specific protease 16; de-ubiquitinates histone H2A; ubiquitous expression. USP16 21q22.11 NM_006447.1 30.1 Above 1.7 new
35 218402_s_at Hermansky-Pudlak syndrome 4 HPS4   NM_022081.1 30.1 Below 3.4 new
36 218495_at Ubiquitously-expressed transcript UXT Xp11.23-p11.22 NM_004182.1 30.1 Above 1.5 new
37 218499_at Mst3 and SOK1-related kinase/STE20-like kinase; contains a Ser/Thr protein kinase domain MST4 Xq26.1 NM_016542.1 30.1 Above 2.5 new
38 218757_s_at Similar to yeast Upf3, variant B UPF3B Xq25-q26 NM_023010.1 30.1 Above 2.3 new
39 219038_at Hypothetical protein FLJ11565 FLJ11565 Xq22.2 NM_024657.1 30.1 Above 6.9 new
40 229967_at Chemokine-like factor super family 2. CKLFSF2 16q23.1 AA778552 30.1 Above 4.3 new
41 242794_at EST   4q31.1 AI569476 30.1 Above 3.2 new
42 201132_at Heterogeneous nuclear ribonucleoprotein H2 (H') HNRPH2 Xq22 NM_019597.1 30.0 Above 2.0 old
43 201312_s_at SH3 domain binding glutamic acid-rich protein like SH3BGRL Xq13.3 NM_003022.1 30.0 Above 1.6 old
44 201894_s_at Decorin; glycoprotein that binds to type I collagen fibrils & plays a role in matrix assembly. DCN 12q13.2 NM_001920.1 30.0 Above 1.5 new
45 201923_at Peroxiredoxin 4 PRDX4 Xp22.13 NM_006406.1 30.0 Above 1.9 old
46 202371_at Hypothetical protein FLJ21174 FLJ21174 Xq22.1 NM_024863.1 30.0 Above 3.6 old
47 203126_at Inositol(myo)-1(or 4)-monophosphatase 2 IMPA2 18p11.2 NM_014214.1 30.0 Above 4.1 old
48 204219_s_at proteasome (prosome, macropain) 26S subunit, ATPase, 1 PSMC1 19p13.3 NM_002802.1 30.0 Above 1.3 old
49 204835_at polymerase (DNA directed), alpha POLA Xp22.1-p21.3 NM_016937.1 30.0 Above 2.0 old
50 212071_s_at Spectrin, beta, non-erythrocytic 1 SPTBN1 2p21 BE968833 30.0 Below 1.7 new
51 212419_at EST   10q22.3 AL049949.1 30.0 Above 13.1 new
52 212718_at Hypothetical protein MGC5370 MGC5378 14q32.2 BG110231 30.0 Above 1.5 new
53 213502_x_at Homo sapiens cDNA FLJ32313 fis, clone PROST2003232, weakly similar to BETA-GLUCURONIDASE PRECURSOR (EC 3.2.1.31) FLJ32313 22q11.23 X03529 30.0 Below 1.8 old
54 214051_at Thymosin, beta TMSNB Xq21.33-q22.3 BF677486 30.0 Above 3.1 new
55 226039_at Mannosyl (alpha-1,3)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase MGAT4A 2q11.2 AW006441 30.0 Above 3.0 new
56 227279_at hypothetical protein MGC15737 MGC15737 Xq22.1 AA847654 30.0 Above 5.6 new
57 200642_at Superoxide dismutase 1, soluble SOD1 21q22.11 NM_000454.1 26.7 Above 2.3 old
58 200799_at Heat shock 70kD protein 1A HSPA1A 6p21.3 NM_005345.3 26.7 Above 2.7 old
59 200943_at High-mobility group (nonhistone chromosomal) protein 14; member of the HMG 14/17 family HMG14 21q22.2 NM_004965.1 26.7 Above 1.6 old
60 201018_at Eukaryotic translation initiation factor 1A EIF1A Xp22.12 BE542684 26.7 Above 1.8 new
61 201311_s_at SH3 domain binding glutamic acid-rich protein like SH3BGRL Xq13.3 AL515318 26.7 Above 1.6 old
62 201443_s_at ATPase, H+ transporting, lysosomal interacting protein 2 ATP6IP2 Xq21 AF248966.1 26.7 Above 1.9 old
63 201472_at Von Hippel-Lindau binding protein 1 VBP1 Xq28 NM_003372.2 26.7 Above 1.7 old
64 201689_s_at Tumor protein D52 TPD52 8q21 BE974098 26.7 Below 4.3 new
65 202602_s_at HIV TAT specific factor 1 HTATSF1 Xq26.1-q27.2 NM_014500.1 26.7 Above 1.5 old
66 203041_s_at Lysosomal-associated membrane protein 2 LAMP2 Xq24 J04183.1 26.7 Above 3.1 old
67 203102_s_at Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase MGAT2 14q21 NM_002408.2 26.7 Above 1.6 new
68 203744_at High-mobility group (nonhistone chromosomal) protein 4 HMG4 Xq28 NM_005342.1 26.7 Above 1.9 new
69 205518_s_at Cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase) CMAH 6p22-p23 NM_003570.1 26.7 Below 2.9 new
70 208683_at Calpain 2, (m/II) large subunit; calcium-dependent Cys protease. CAPN2 1q41-q42 M23254.1 26.7 Above 2.2 old
71 209440_at Phosphoribosyl pyrophosphate synthetase 1; purine biosynthesis. PRPS1 Xq21-q27 BC001605.1 26.7 Above 1.4 old
72 210786_s_at Friend leukemia virus integration 1 FLI1 11q24.1-q24.3 M93255.1 26.7 Below 2.5 old
73 212070_at G protein-coupled receptor 56 GPR56 16q13 AL554008 26.7 Above 2.4 new
74 213334_x_at Three prime repair exonuclease 2 TREX2 Xq28 BE676218 26.7 Above 1.7 old
75 215117_at Recombination activating gene 2; V(D)J recombinase. RAG2 11p13 AW058148 26.7 Below 27.2 old
76 218694_at ALEX1 protein ALEX1 Xq21.33-q22.2 NM_016608.1 26.7 Above 2.8 new
77 222741_s_at hypothetical protein FLJ11101 FLJ11101 6p21.1 AI761426 26.7 Above 1.5 new
78 223082_at SH3-domain kinase binding protein 1 SH3KBP1 Xp22.1-p21.3 AF230904.1 26.7 Above 2.0 new
79 225105_at clone MGC:23936 IMAGE:3838595, mRNA, complete cds   12q23.3 BF969397 26.7 Above 2.1 new
80 225406_at Twisted gastrulation TSG 18p11.3 AA195009 26.7 Above 1.9 new
81 225553_at Homo sapiens cDNA FLJ12874 fis   14q22.2 AL042817 26.7 Above 1.6 new
82 226199_at Hypothetical protein MGC23937 MGC23937 Xq13.1 AL563795 26.7 Above 2.1 new
83 226875_at Hypothetical protein FLJ32122 FLJ32122 Xq24 AI742838 26.7 Above 2.3 new
84 232974_at cDNA FLJ12417 fis   Xp22.31 AU148256 26.7 Above 3.1 new
85 46323_at Ca2+-dependent endoplasmic reticulum nucleoside diphosphatase SHAPY 17q25.3 AL120741 26.7 Above 1.7 new
86 203694_s_at DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 16 DDX16 6p21.3 NM_003587.2 26.3 Above 1.3 old
87 200658_s_at Prohibitin PHB 17q21 AL560017 26.3 Above 2.0 old
88 201898_s_at ubiquitin-conjugating enzyme E2A (RAD6 homolog) UBE2A Xq24-q25 AI126625 26.3 Above 1.6 old
89 203556_at KIAA0854 protein KIAA0854 8q24.13 NM_014943.1 26.3 Below 1.6 old
90 203745_at Holocytochrome c synthase (cytochrome c heme-lyase) HCCS Xp22.3 AI801013 26.3 Above 2.1 new
91 203909_at Solute carrier family 9 (sodium/hydrogen exchanger), isoform 6 SLC9A6 Xq26.3 NM_006359.1 26.3 Above 1.9 old
92 204446_s_at Arachidonate 5-lipoxygenase ALOX5 10q11.2 NM_000698.1 26.3 Above 4.2 old
93 205191_at Retinitis pigmentosa 2 (X-linked recessive) RP2 Xp11.4-p11.21 NM_006915.1 26.3 Above 2.1 old
94 206874_s_at Ste20-related serine/threonine kinase SLK 10q25.1 AL138761 26.3 Above 1.6 new
95 208073_x_at Tetratricopeptide repeat domain 3 TTC3 21q22.2 NM_003316.1 26.3 Above 1.9 old
96 209056_s_at CDC5 cell division cycle 5-like (S. pombe) CDC5L 6p21 AW268817 26.3 Above 1.4 new
97 210645_s_at Tetratricopeptide repeat domain 3 TTC3 21q22.2 D83077.1 26.3 Above 2.2 old
98 215773_x_at ADP-ribosyltransferase (NAD+; poly(ADP-ribose) polymerase)-like 2 ADPRTL2 14q11.2-q12 AJ236912.1 26.3 Above 1.6 old
99 215884_s_at Ubiquilin 2 UBQLN2 Xp11.23-p11.1 AK001029.1 26.3 Above 1.9 new
100 217954_s_at PHD finger protein 3 PHF3 6 NM_015153.1 26.3 Above 1.5 new

Table S6. Top 100 chi-square probe sets selected for MLL in decision tree format

  U133 probe set

Gene description

 Symbol Location GenBank Reference Chi-square value MLL
above/below mean		 Fold change old or new
1 202603_at a disintegrin and metalloproteinase domain 10 ADAM10 15q22 N51370 44.6 Above 1.8 old
2 219463_at chromosome 20 open reading frame 103 C20orf103 20p12 NM_012261.1 44.6 Above 24.7 new
3 224772_at neuron navigator 1 NAV1   AB032977.1 44.6 Below 3.8 new
4 204069_at Meis1, myeloid ecotropic viral integration site 1 homolog MEIS1 2p14-p13 NM_002398.1 44.4 Above 73.7 old
5 218966_at myosin 5C MYO5C 15q21 NM_018728.1 44.4 Below 4.5 new
6 226939_at cDNA FLJ37247 fis FLJ37247   AI202327 44.4 Above 6.9 new
7 204446_s_at arachidonate 5-lipoxygenase ALOX5 10q11.2 NM_000698.1 40.7 Below 66.8 old
8 206492_at fragile histidine triad gene FHIT 3p14.2 NM_002012.1 40.7 Below 36.6 old
9 212588_at protein tyrosine phosphatase, receptor type, C PTPRC 1q31-q32 AI809341 40.7 Above 2.3 old
10 215925_s_at CD72 antigen CD72 9p11.2 AF283777.2 40.7 Above 3.0 old
11 211733_x_at sterol carrier protein 2 SCP2 1p32 BC005911.1 40.1 Above 1.5 old
12 212386_at cDNA FLJ11918 fis FLJ11918   AK021980.1 40.1 Below 3.1 new
13 218764_at Protein Kinase C eta isoform. PRKCH 14q22.1-q22.3 NM_024064.1 40.1 Below 7.6 new
14 218847_at IGF-II mRNA-binding protein 2 IMP-2 3q28 NM_006548.1 40.1 Above 23.2 new
15 222409_at coronin, actin binding protein, 1C CORO1C 12q24.1 AL162070.1 40.1 Above 4.8 new
16 242172_at ESTs     N50406 40.1 Above 33.6 new
17 201153_s_at muscleblind-like (Drosophila) MBNL 3q25 NM_021038.1 40.0 Above 2.1 old
18 210487_at deoxynucleotidyltransferase, terminal DNTT 10q23-q24 M11722.1 40.0 Below 2.9 old
19 219686_at gene for serine/threonine protein kinase HSA250839 4p16.2 NM_018401.1 40.0 Below 28.3 new
20 226981_at Homo sapiens, clone IMAGE:4401491, mRNA     AW002079 37.4 Below 1.0 new
21 203375_s_at tripeptidyl peptidase II TPP2 13q32-q33 NM_003291.1 37.2 Above 1.6 new
22 221676_s_at coronin, actin binding protein, 1C CORO1C 12q24.1 BC002342.1 37.2 Above 3.5 new
23 201152_s_at muscleblind-like (Drosophila) MBNL 3q25 NM_021038.1 36.2 Above 2.2 old
24 221773_at ELK3, ETS-domain protein (SRF accessory protein 2) ELK3 12q23 AW575374 36.2 Below 8.2 new
25 201162_at insulin-like growth factor binding protein 7 IGFBP7 4q12 NM_001553.1 36.0 Above 4.3 old
26 201163_s_at insulin-like growth factor binding protein 7 IGFBP7 4q12 NM_001553.1 36.0 Above 4.0 old
27 203836_s_at mitogen-activated protein kinase kinase kinase 5 MAP3K5 6q22.33 D84476.1 36.0 Above 13.9 old
28 203837_at mitogen-activated protein kinase kinase kinase 5 MAP3K5 6q22.33 NM_005923.2 36.0 Above 4.2 old
29 213891_s_at cDNA FLJ11918 fis FLJ11918   AI927067 36.0 Below 3.2 new
30 214895_s_at a disintegrin and metalloproteinase domain 10 ADAM10 15q22 AU135154 36.0 Above 1.9 old
31 226415_at KIAA1576 protein KIAA1576 16q22.1 AA156723 36.0 Above 40.7 new
32 235879_at ESTs     AI697540 36.0 Above 3.8 new
33 212387_at  cDNA FLJ11918 fis FLJ11918   AK021980.1 35.8 Below 3.3 new
34 218988_at bladder cancer over expressed protein BLOV1 12q15 NM_018656.1 35.8 Below 16.3 new
35 228555_at EST; by BLAT calcium/calmodulin-dependent Protine Kinase type II Delta chain  (CAMK GROUP I) CAMK2D   AA029441 35.8 Above 3.1 new
36 202975_s_at Rho-related BTB domain containing 3 RHOBTB3 5q21.2 N21138 35.3 Above 5.5 old
37 201105_at lectin, galactoside-binding, soluble, 1 (galectin 1) LGALS1 22q13.1 NM_002305.2 34.5 Above 14.5 old
38 203434_s_at membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase, CALLA, CD10) MME 3q25.1-q25.2 AI433463 34.1 Below 31.2 old
39 212135_s_at calcium transporting ATPase plasma membrane  protein. ATP2B4   AW517686 34.1 Below 2.4 new
40 212136_at calcium transporting ATPase plasma membrane  protein. ATP2B4   AW517686 34.1 Below 2.1 new
41 230179_at cDNA DKFZp547P158 DKFZp547P158   N52572 34.1 Below 6.4 new
42 218217_at likely homolog of rat and mouse retinoid-inducible serine carboxypeptidase RISC 17q23.2 NM_021626.1 32.8 Above 3.4 new
43 225841_at hypothetical protein FLJ30525 FLJ30525 1p13.2 BE502436 32.8 Above 1.8 new
44 226668_at hypothetical protein FLJ36175 FLJ36175   W80623 32.8 Above 2.4 new
45 200989_at hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) HIF1A 14q21-q24 NM_001530.1 32.2 Below 1.8 old
46 201151_s_at muscleblind-like (Drosophila) MBNL 3q25 NM_021038.1 32.2 Above 2.6 old
47 201563_at sorbitol dehydrogenase SORD 15q15.3 L29008.1 32.2 Above 1.8 new
48 203753_at transcription factor 4 TCF4 18q21.1 NM_003199.1 32.2 Below 2.9 new
49 205668_at lymphocyte antigen 75 LY75 2q24 NM_002349.1 32.2 Above 2.1 new
50 206471_s_at plexin C1 PLXNC1 12q23.3 NM_005761.1 32.2 Above 7.7 old
51 211302_s_at phosphodiesterase 4B, cAMP-specific PDE4B 1p31 L20966.1 32.2 Below 3.0 old
52 212012_at Melanoma associated gene D2S448 2pter-p25.1 AF200348.1 32.2 Below 2.4 old
53 212063_at CD44 antigen CD44 11p13 BE903880 32.2 Above 3.1 new
54 213241_at plexin C1 PLXNC1   AF035307.1 32.2 Above 2.5 old
55 214651_s_at homeo box A9 HOXA9 7p15-p14 U41813.1 32.2 Above 28.5 old
56 218140_x_at APMCF1 protein APMCF1 3q22.2 NM_021203.1 32.2 Above 1.4 new
57 219988_s_at hypothetical protein FLJ10597 FLJ10597 1p34.1 NM_018150.1 32.2 Above 1.9 new
58 223046_at egl nine homolog 1 (C. elegans) EGLN1 1q42.1 NM_022051.1 32.2 Below 4.2 new
59 224150_s_at p10-binding protein BITE 3q22-q23 AF289495.1 32.2 Above 2.1 new
60 224933_s_at hypothetical protein DKFZp761F0118 DKFZp761F0118 10q22.1 AB037801.1 32.2 Above 1.9 new
61 201078_at transmembrane 9 superfamily member 2 TM9SF2 13q32.3 NM_004800.1 32.0 Above 1.5 new
62 205550_s_at brain and reproductive organ-expressed (TNFRSF1A modulator) BRE 2p23.3 NM_004899.1 32.0 Above 2.0 new
63 212382_at  cDNA FLJ11918 fis FLJ11918   AK021980.1 32.0 Below 2.7 new
64 225019_at calcium/calmodulin-dependent protein kinase (CaM kinase) II delta CAMK2D 4q25 AA777512 32.0 Above 3.6 new
65 225202_at Rho-related BTB domain containing 3 RHOBTB3 5q21.2 BE620739 32.0 Above 5.5 old
66 228855_at nudix (nucleoside diphosphate linked moiety X)-type motif 7 NUDT7   AI927964 32.0 Above 5.6 new
67 231899_at KIAA1726 protein KIAA1726 11q23.1 AB051513.1 32.0 Above 33.0 new
68 52164_at chromosome 11 open reading frame 24 C11orf24 11q13 AA065185 32.0 Above 2.3 new
69 212660_at KIAA0239 protein KIAA0239 5q31.1 AI735639 31.7 Below 1.7 old
70 213513_x_at actin related protein 2/3 complex, subunit 2, 34kDa ARPC2 2q36.1 BG034239 31.7 Above 1.3 old
71 222603_at hypothetical protein FLJ23309 FLJ23309 9p24 AL136980 31.7 Above 3.6 new
72 238558_at ESTs     AI445833 31.7 Above 3.8 new
73 202391_at brain abundant, membrane attached signal protein 1 BASP1 5p15.1-p14 NM_006317.1 31.3 Above 2.1 old
74 202604_x_at a disintegrin and metalloproteinase domain 10 ADAM10 15q22 NM_001110.1 31.3 Above 1.8 old
75 203435_s_at membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase, CALLA, CD10) MME 3q25.1-q25.2 NM_007287.1 31.3 Below 54.8 old
76 204445_s_at arachidonate 5-lipoxygenase ALOX5 10q11.2 AI361850 31.3 Below 687.0 old
77 209705_at likely ortholog of mouse metal response element binding transcription factor 2 M96 1p22.1 AF073293.1 31.3 Below 1.5 old
78 214366_s_at arachidonate 5-lipoxygenase ALOX5 10q11.2 AA995910 31.3 Below 54.7 old
79 215000_s_at fasciculation and elongation protein zeta 2 (zygin II) FEZ2 2p21 AL117593.1 31.3 Above 1.7 new
80 220643_s_at Fas apoptotic inhibitory molecule FAIM 3q23 NM_018147.1 31.3 Above 2.9 new
81 226459_at Homo sapiens gastric cancer-related protein GCYS-20 (gcys-20) mRNA, complete cds     AW575754 31.3 Above 1.6 new
82 238712_at ESTs     BF801735 31.3 Above 2.7 new
83 229686_at cDNA FLJ35637 fis FLJ35637   AI436587 31.0 Below 1.5 new
84 222620_s_at hypothetical protein similar to mouse Dnajl1 DNAJL1 10p11.23 BF591419 29.8 Above 2.4 new
85 224516_s_at hypothetical protein HSPC195 HSPC195 5q31.3 BC006428.1 29.8 Above 2.7 new
86 203217_s_at sialyltransferase 9 (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase; GM3 synthase) SIAT9 2p11.2 NM_003896.1 28.8 Below 2.1 new
87 204030_s_at schwannomin interacting protein 1 SCHIP1 3q25.32 NM_014575.1 28.8 Below 17.6 old
88 209191_at tubulin beta-5 TUBB-5   BC002654.1 28.8 Above 6.4 new
89 213541_s_at v-ets erythroblastosis virus E26 oncogene like (avian) ERG 21q22.3 AI351043 28.8 Below 2.8 old
90 213773_x_at Williams Beuren syndrome chromosome region 20A WBSCR20A 7q11.23 AW248552 28.8 Above 1.3 new
91 219243_at immunity associated protein 4 HIMAP4 7q35 NM_018326.1 28.8 Below 13.4 new
92 219256_s_at hypothetical protein FLJ20356 FLJ20356 4p16.1 NM_018986.1 28.8 Below 2.6 new
93 223358_s_at phosphodiesterase 7A PDE7A 8q13 AW269834 28.8 Above 1.5 new
94 224796_at development and differentiation enhancing factor 1 DDEF1 8q24.1-q24.2 W03103 28.8 Below 1.8 new
95 203076_s_at MAD, mothers against decapentaplegic homolog 2 (Drosophila) MADH2 18q21.1 U65019.1 28.7 Below 2.0 new
96 212385_at cDNA FLJ11918 fis FLJ11918   AK021980.1 28.7 Below 3.2 new
97 216026_s_at polymerase (DNA directed), epsilon POLE 12q24.3 AL080203.1 28.7 Below 3.0 old
98 217118_s_at KIAA0930 protein KIAA0930 22q13.31 AK025608.1 28.7 Above 1.9 new
99 219821_s_at hypothetical protein FLJ20330 FLJ20330 6pter-p22.1 NM_018988.1 28.7 Below 5.5 new
100 201875_s_at hypothetical protein FLJ21047 FLJ21047 1q23.2 NM_024569.1 28.5 Above 2.0 new

Section III continued...